Index A | B | C | D | E | F | G | I | L | M | N | P | Q | R | S | T | V | X | Z A aggregate_lrc_across_seeds() (in module smx.graph.centrality) aim (smx.predicates.metrics.PerturbationMetric attribute) annotation_font_size (smx.plotting.theme.SMXTheme attribute) B BasePredicateMetric (class in smx.predicates.metrics) blend_with_white() (in module smx.plotting.theme) build() (smx.graph.builder.PredicateGraphBuilder method) build_blended_colorscale() (in module smx.plotting.theme) building_spectral_zones() (in module smx.zones.build) C class_colors (smx.plotting.theme.SMXTheme attribute) class_line_width (smx.plotting.theme.SMXTheme attribute) class_threshold (smx.pipeline.SMX attribute) co_occurrence_matrix_ (smx.predicates.generation.PredicateGenerator attribute) colorbar_len (smx.plotting.theme.SMXTheme attribute) colorbar_thickness (smx.plotting.theme.SMXTheme attribute) colorscale (smx.plotting.theme.SMXTheme attribute) compute() (smx.predicates.metrics.BasePredicateMetric method) (smx.predicates.metrics.CovarianceMetric method) (smx.predicates.metrics.PerturbationMetric method) compute_lrc() (in module smx.graph.centrality) covariance_threshold (smx.pipeline.SMX attribute) CovarianceMetric (class in smx.predicates.metrics) D DEFAULT_THEME (in module smx.plotting.theme) E estimator (smx.pipeline.SMX attribute) (smx.predicates.metrics.PerturbationMetric attribute) evaluate_faithfulness() (smx.pipeline.SMX method) extract_predicate_info() (in module smx.graph.interpretation) extract_spectral_zones() (in module smx.zones.extraction) F faithfulness_ (smx.pipeline.SMX attribute) FaithfulnessMetric (in module smx.evaluation.faithfulness) fallback_palette (smx.plotting.theme.SMXTheme attribute) fit() (smx.pipeline.SMX method) (smx.predicates.generation.PredicateGenerator method) (smx.zones.aggregation.ZoneAggregator method) fit_transform() (smx.predicates.generation.PredicateGenerator method) (smx.zones.aggregation.ZoneAggregator method) font_family (smx.plotting.theme.SMXTheme attribute) font_size (smx.plotting.theme.SMXTheme attribute) G gaussian_peak_model() (in module smx.datasets.synthetic) generate_synthetic_spectral_data() (in module smx.datasets.synthetic) get_variance_explained() (smx.zones.aggregation.ZoneAggregator method) graphs_by_seed_ (smx.pipeline.SMX attribute) I indicator_df_ (smx.predicates.generation.PredicateGenerator attribute) is_fitted_ (smx.zones.aggregation.ZoneAggregator attribute) L logger (in module smx.pipeline) lrc_natural_ (smx.pipeline.SMX attribute) lrc_summed_ (smx.pipeline.SMX attribute) lrc_summed_unique_ (smx.pipeline.SMX attribute) M map_thresholds_to_natural() (in module smx.graph.interpretation) MaskingStrategy (in module smx.evaluation.faithfulness) method (smx.zones.aggregation.ZoneAggregator attribute) metric (smx.pipeline.SMX attribute) (smx.predicates.metrics.CovarianceMetric attribute) (smx.predicates.metrics.PerturbationMetric attribute) metric_column (smx.predicates.metrics.CovarianceMetric property) (smx.predicates.metrics.PerturbationMetric property) module smx smx.datasets smx.datasets.synthetic smx.evaluation smx.evaluation.faithfulness smx.graph smx.graph.builder smx.graph.centrality smx.graph.interpretation smx.pipeline smx.plotting smx.plotting.summary smx.plotting.theme smx.plotting.threshold smx.plotting.zones smx.predicates smx.predicates.bagging smx.predicates.generation smx.predicates.metrics smx.zones smx.zones.aggregation smx.zones.build smx.zones.extraction N n_bags (smx.pipeline.SMX attribute) (smx.predicates.bagging.PredicateBagger attribute) n_neighbors (smx.predicates.metrics.CovarianceMetric attribute) n_predicates_per_bag (smx.predicates.bagging.PredicateBagger attribute) n_repetitions (smx.pipeline.SMX attribute) n_samples_fraction (smx.pipeline.SMX attribute) (smx.predicates.bagging.PredicateBagger attribute) normalize_by_zone_size (smx.pipeline.SMX attribute) (smx.predicates.metrics.PerturbationMetric attribute) P pca_info_ (smx.pipeline.SMX attribute) (smx.zones.aggregation.ZoneAggregator attribute) pca_info_dict (smx.graph.builder.PredicateGraphBuilder attribute) pca_info_natural_ (smx.pipeline.SMX attribute) perturbation_metric (smx.pipeline.SMX attribute) perturbation_mode (smx.pipeline.SMX attribute) (smx.predicates.metrics.PerturbationMetric attribute) perturbation_stats_source (smx.pipeline.SMX attribute) perturbation_value (smx.pipeline.SMX attribute) (smx.predicates.metrics.PerturbationMetric attribute) PerturbationMetric (class in smx.predicates.metrics) plot_all_thresholds_overlay() (in module smx.plotting.summary) plot_faithfulness() (smx.pipeline.SMX method) plot_faithfulness_curve() (in module smx.plotting.summary) plot_lrc_bar() (in module smx.plotting.summary) plot_predicate_heatmap() (in module smx.plotting.summary) plot_spectrum_with_zones() (in module smx.plotting.zones) plot_threshold_spectrum() (in module smx.plotting.threshold) plot_zone_ranking_over_spectrum() (in module smx.plotting.zones) (smx.pipeline.SMX method) plot_zone_scores() (in module smx.plotting.summary) plotly_layout() (smx.plotting.theme.SMXTheme method) predicate_bagging (smx.predicates.bagging.PredicateBagger attribute) PredicateBagger (class in smx.predicates.bagging) PredicateGenerator (class in smx.predicates.generation) PredicateGraphBuilder (class in smx.graph.builder) predicates_df (smx.predicates.metrics.PerturbationMetric attribute) predicates_df_ (smx.pipeline.SMX attribute) (smx.predicates.generation.PredicateGenerator attribute) progressive_masking_faithfulness() (in module smx.evaluation.faithfulness) Q quantiles (smx.pipeline.SMX attribute) (smx.predicates.generation.PredicateGenerator attribute) R random_seed (smx.predicates.bagging.PredicateBagger attribute) random_state (smx.graph.builder.PredicateGraphBuilder attribute) reconstruct_threshold_to_spectrum() (in module smx.graph.interpretation) reference_line_color (smx.plotting.theme.SMXTheme attribute) reference_line_dash (smx.plotting.theme.SMXTheme attribute) reference_line_width (smx.plotting.theme.SMXTheme attribute) replace (smx.pipeline.SMX attribute) (smx.predicates.bagging.PredicateBagger attribute) resolve_class_color() (smx.plotting.theme.SMXTheme method) run() (smx.predicates.bagging.PredicateBagger method) S sample_bagging (smx.predicates.bagging.PredicateBagger attribute) save_detailed_results (smx.predicates.metrics.PerturbationMetric attribute) seeds (smx.pipeline.SMX attribute) show_details (smx.graph.builder.PredicateGraphBuilder attribute) show_graph_details (smx.pipeline.SMX attribute) smx module SMX (class in smx.pipeline) smx.datasets module smx.datasets.synthetic module smx.evaluation module smx.evaluation.faithfulness module smx.graph module smx.graph.builder module smx.graph.centrality module smx.graph.interpretation module smx.pipeline module smx.plotting module smx.plotting.summary module smx.plotting.theme module smx.plotting.threshold module smx.plotting.zones module smx.predicates module smx.predicates.bagging module smx.predicates.generation module smx.predicates.metrics module smx.zones module smx.zones.aggregation module smx.zones.build module smx.zones.extraction module SMXTheme (class in smx.plotting.theme) spectral_cuts (smx.pipeline.SMX attribute) (smx.predicates.metrics.PerturbationMetric attribute) SpectralCuts (in module smx.pipeline) stats_source (smx.predicates.metrics.PerturbationMetric attribute) T template (smx.plotting.theme.SMXTheme attribute) threshold (smx.predicates.metrics.CovarianceMetric attribute) threshold_color (smx.plotting.theme.SMXTheme attribute) threshold_line_dash (smx.plotting.theme.SMXTheme attribute) threshold_line_width (smx.plotting.theme.SMXTheme attribute) transform() (smx.predicates.generation.PredicateGenerator method) (smx.zones.aggregation.ZoneAggregator method) V valid_seeds_ (smx.pipeline.SMX attribute) var_exp (smx.graph.builder.PredicateGraphBuilder attribute) (smx.pipeline.SMX attribute) verbose (smx.predicates.metrics.PerturbationMetric attribute) X Xcalclass_prep (smx.predicates.metrics.PerturbationMetric attribute) Z zone_boundary_color (smx.plotting.theme.SMXTheme attribute) zone_boundary_dash (smx.plotting.theme.SMXTheme attribute) zone_boundary_width (smx.plotting.theme.SMXTheme attribute) zone_opacity (smx.plotting.theme.SMXTheme attribute) zone_scores_ (smx.pipeline.SMX attribute) zone_size_exponent (smx.pipeline.SMX attribute) (smx.predicates.metrics.PerturbationMetric attribute) ZoneAggregator (class in smx.zones.aggregation) zones_natural_ (smx.pipeline.SMX attribute)
